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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822365.1_cds_XP_016501091.1_14858
CDS Infomation

[gene=LOC107819495] [db_xref=GeneID:107819495] [protein=mucin-5AC-like isoform X2] [protein_id=XP_016501091.1] [location=complement(join(16765..17022,17356..18420,19098..19212,20266..20365,20764..20953))] [gbkey=CDS]
Sequence

ATGAATGGAAGTTTTAGGGCAGAGGAAACGGCAATGAGGCAGTTACAACAGCAAATGGGG
AGTTTTAGGAATTCAGTAATGAAGGAGAAGGAAGAGGAGTTAGCTTTGTTTCTCGAAATG
CGAAGAAGGGAAAAGGATAGAAATGATCTTCTCCTTTTTCAAAACGGCGACGAATTTGAT
GCTCCGCTTGGCGGTTCACCTTTATTTAATATTGGATCAGCTACAACTGTTAGGAAGAAT
GGTGCTGATGATTTCCTCAATGCTGAGAATGATAAAAATGACTATGAATGGCTTCTAACA
CCTCCCAGTACTCCTCTTTTTCCTTCACTTGAGATGGAGTCGGAAAAATCAATGATGAGT
CGGCTGGGAACAGCTAAAGCTCGTCCAACTGCATTAAAATCTAGATTAGCAAATCCCCAG
CCTGAGCCCTCTGGTAGAAGCATTTTAGCATCTAGACAGCTTGCTTCCACCCATGGATTA
AATACTTCAAATTCAGGACTTCGAAGACCATCTTCATCAGGTGGATCAAGACCTTCAACT
CCAACAGGACGACCCACATTAAGCGCAATATCTGCTTTGACATCAGCATCTAGACGCACA
TCTACTGCAGCATCAAAATCAATGACATCCACTGCAACCTCTAGAACAGTGTATACCACT
ACCTCGTCTCGGCCATCAAGGTCTTCAACCCCAACTTCTCGTGCCACCTTGCCTTCTGCT
AAATCCACAGTTCCTCCAAGATCTTCAACACCTACTTCCAGGTCTAGTGCAAGGTCCTCA
ACGCCAACAACCAGAGCTTCCTCAACGCCCACAACCAGGGCCTCTGTTCCTGGATCGAAG
TCCACATCAAGGGTAGCAACTCCAACTCGGCGGCCTACTTCAGTGTCAAGTACAGCTACT
GCTACTGCTCCTCTCATTAAATCTCCATCTTCAGTTACCACAGCTACCACTACGGCAAGA
AATCCTGGATACTCACGTGCTAGTTCTCCAACTGTAAAACCCAGACCTTGGAAGCCTTCA
GATATTCCAGGGTTCTCCCTTGATGCTCCACCCAATTTACGGACATCACTATCTGACAGG
CCAATTTCAGCTACAAGGGGTAGACCTGGAGCACCAAATGTTAGATCTTCATCCATTGAG
CCAGTTACAAATGGAAGGATTAGACGACAATCTTGCTCTCCAGCGAGAGGACGTCCTCCT
AATGGTGTTGTGCGTAGCAGTGGAAGCTCTGTTCCGATCCCAGCTATGAGTCGATTACAT
GCTAAAGCTAATGATAATGTAAGCCCTGGTCTGATTGGAACTAAGATGGTTGAAAGGGTA
GTAAATATGCGGAAGCTGGCTCCTCCTGCAAAGCAGGATAACAAATATTCTCCCCGTAGT
AACTTATCTGCAAACTCTTCATCACCTGACAGCTCGGGTTTTGGAAGGACACTGTCAAAG
AAATCCCTGGATATGGCTATGAGGCATATGGATATAAGGCGAAGCATCCCAGGTATTCTG
CGTCCATCGATGACTAATATTCCAGCATCCTCTATGTACAGTGTGAGATCAGGACCTAAC
AGAAGCAGGACAGTGAGTGTATCTGACTCCCCACTTCATACGAGCAGTAATGCTAGTTCT
GAAGTGAGCATCAATAACAATGCGGTGTGTGTTGATGGGAGTGAAGTTGATGATGCTATT
AGCAGTGATAAAGGTGTTCGATCTCCTGCCGGTATGCGTGGAAGGTGA

Peptide Sequence

PEP ID

XP_016501091.1
PEP Infomation

PREDICTED: mucin-5AC-like isoform X2 [Nicotiana tabacum]
Sequence

MNGSFRAEETAMRQLQQQMGSFRNSVMKEKEEELALFLEMRRREKDRNDLLLFQNGDEFD
APLGGSPLFNIGSATTVRKNGADDFLNAENDKNDYEWLLTPPSTPLFPSLEMESEKSMMS
RLGTAKARPTALKSRLANPQPEPSGRSILASRQLASTHGLNTSNSGLRRPSSSGGSRPST
PTGRPTLSAISALTSASRRTSTAASKSMTSTATSRTVYTTTSSRPSRSSTPTSRATLPSA
KSTVPPRSSTPTSRSSARSSTPTTRASSTPTTRASVPGSKSTSRVATPTRRPTSVSSTAT
ATAPLIKSPSSVTTATTTARNPGYSRASSPTVKPRPWKPSDIPGFSLDAPPNLRTSLSDR
PISATRGRPGAPNVRSSSIEPVTNGRIRRQSCSPARGRPPNGVVRSSGSSVPIPAMSRLH
AKANDNVSPGLIGTKMVERVVNMRKLAPPAKQDNKYSPRSNLSANSSSPDSSGFGRTLSK
KSLDMAMRHMDIRRSIPGILRPSMTNIPASSMYSVRSGPNRSRTVSVSDSPLHTSSNASS
EVSINNNAVCVDGSEVDDAISSDKGVRSPAGMRGR

Transcript Sequence

Gene sequence data has not been registered.